Dca36634.1
Annotation
- 4-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3863)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36634.1 |
1 |
417 |
556 |
50.35 |
417 |
63 |
8e-171
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
928 |
1375 |
1788 |
25.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36634.1 |
1 |
307 |
556 |
19.24 |
307 |
35 |
5e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
96 |
398 |
591 |
51.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3863 |
Augustus |
mRNA |
264 |
3639 |
. |
+ |
. |
ID=Dca36634.1;Parent=Dca36634 |
| scaffold3863 |
Augustus |
exon |
264 |
1255 |
. |
+ |
. |
ID=Dca36634.1.exon1;Parent=Dca36634.1 |
| scaffold3863 |
Augustus |
exon |
1348 |
1606 |
. |
+ |
. |
ID=Dca36634.1.exon2;Parent=Dca36634.1 |
| scaffold3863 |
Augustus |
exon |
2743 |
3161 |
. |
+ |
. |
ID=Dca36634.1.exon3;Parent=Dca36634.1 |
| scaffold3863 |
Augustus |
exon |
3267 |
3639 |
. |
+ |
. |
ID=Dca36634.1.exon4;Parent=Dca36634.1 |
