Carnation DB

Dca36642.1

Annotation

5-exons
f-1
sp|B9HVB6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_726687#GO:0003676;GO:0004523#2F0P0C
Os08t0177800-00 Similar to RNase H domain-containing protein.
Repeat List (scaffold3864)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36642.1	50	175	310	19.67	126	41	8e-19
Target_name	Start	End	Length	Cov(%)
sp\|B9HVB6_POPTR	34	172	282	49.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36642.1	50	175	310	17.09	126	39	2e-15
Target_name	Start	End	Length	Cov(%)
Os08t0177800-00	114	234	352	34.37

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3864	Augustus	mRNA	1063	10503	.	-	.	ID=Dca36642.1;Parent=Dca36642
scaffold3864	Augustus	exon	1063	1470	.	-	.	ID=Dca36642.1.exon1;Parent=Dca36642.1
scaffold3864	Augustus	exon	4425	4535	.	-	.	ID=Dca36642.1.exon2;Parent=Dca36642.1
scaffold3864	Augustus	exon	4714	4820	.	-	.	ID=Dca36642.1.exon3;Parent=Dca36642.1
scaffold3864	Augustus	exon	4965	5194	.	-	.	ID=Dca36642.1.exon4;Parent=Dca36642.1
scaffold3864	Augustus	exon	10427	10503	.	-	.	ID=Dca36642.1.exon5;Parent=Dca36642.1