Carnation DB

Dca36809.1

Annotation

5-exons
f-1
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold3891)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36809.1	3	415	1137	15.74	413	36	5e-67
Target_name	Start	End	Length	Cov(%)
sp\|A2I5E5_BETVU	127	623	1501	33.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36809.1	211	415	1137	6.33	205	30	6e-14
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	414	653	1539	15.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3891	Augustus	mRNA	25090	30114	.	+	.	ID=Dca36809.1;Parent=Dca36809
scaffold3891	Augustus	exon	25090	25845	.	+	.	ID=Dca36809.1.exon1;Parent=Dca36809.1
scaffold3891	Augustus	exon	26514	26825	.	+	.	ID=Dca36809.1.exon2;Parent=Dca36809.1
scaffold3891	Augustus	exon	26905	27075	.	+	.	ID=Dca36809.1.exon3;Parent=Dca36809.1
scaffold3891	Augustus	exon	27560	29386	.	+	.	ID=Dca36809.1.exon4;Parent=Dca36809.1
scaffold3891	Augustus	exon	29767	30114	.	+	.	ID=Dca36809.1.exon5;Parent=Dca36809.1