Carnation DB

Dca36817.1

Annotation

7-exons
f-1
sp|B9S977_RICCO#Malate dehydrogenase#Ricinus communis (Castor bean)#ORFNames=RCOM_1014110#GO:0030060;GO:0000166;GO:0044262;GO:0006108;GO:0006099#2F3P0C
Repeat List (scaffold3893)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36817.1	5	341	345	77.1	337	79	1e-150
Target_name	Start	End	Length	Cov(%)
sp\|B9S977_RICCO	1	339	343	98.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36817.1	1	341	345	77.68	341	79	7e-151
Target_name	Start	End	Length	Cov(%)
Os01t0649100-02	1	337	341	98.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3893	Augus-PASA	mRNA	3485	6861	.	+	.	ID=Dca36817.1;Parent=Dca36817
scaffold3893	Augus-PASA	exon	3485	3736	.	+	.	ID=Dca36817.1.exon1;Parent=Dca36817.1
scaffold3893	Augus-PASA	exon	4847	5020	.	+	.	ID=Dca36817.1.exon2;Parent=Dca36817.1
scaffold3893	Augus-PASA	exon	5263	5431	.	+	.	ID=Dca36817.1.exon3;Parent=Dca36817.1
scaffold3893	Augus-PASA	exon	5570	5631	.	+	.	ID=Dca36817.1.exon4;Parent=Dca36817.1
scaffold3893	Augus-PASA	exon	6106	6227	.	+	.	ID=Dca36817.1.exon5;Parent=Dca36817.1
scaffold3893	Augus-PASA	exon	6397	6514	.	+	.	ID=Dca36817.1.exon6;Parent=Dca36817.1
scaffold3893	Augus-PASA	exon	6721	6861	.	+	.	ID=Dca36817.1.exon7;Parent=Dca36817.1