Carnation DB

Dca36867.1

Annotation

7-exons
f-84
sp|D7U0I4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g04360#unknown#0F0P0C
sp|B9RQK0_RICCO#Thylakoid membrane phosphoprotein 14 kDa, chloroplast, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1493520#unknown#0F0P0C
Repeat List (scaffold39)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36867.1	3	143	143	57.34	141	58	9e-37
Target_name	Start	End	Length	Cov(%)
sp\|D7U0I4_VITVI	4	146	146	97.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36867.1	1	143	143	53.84	143	49	7e-35
Target_name	Start	End	Length	Cov(%)
AT1G52220.1	1	156	156	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold39	PASA	mRNA	239508	242777	.	+	.	ID=Dca36867.1;Parent=Dca36867
scaffold39	PASA	exon	239508	239576	.	+	.	ID=Dca36867.1.exon1;Parent=Dca36867.1
scaffold39	PASA	exon	239711	239824	.	+	.	ID=Dca36867.1.exon2;Parent=Dca36867.1
scaffold39	PASA	exon	241400	241488	.	+	.	ID=Dca36867.1.exon3;Parent=Dca36867.1
scaffold39	PASA	exon	241606	241692	.	+	.	ID=Dca36867.1.exon4;Parent=Dca36867.1
scaffold39	PASA	exon	241783	241845	.	+	.	ID=Dca36867.1.exon5;Parent=Dca36867.1
scaffold39	PASA	exon	242173	242210	.	+	.	ID=Dca36867.1.exon6;Parent=Dca36867.1
scaffold39	PASA	exon	242469	242777	.	+	.	ID=Dca36867.1.exon7;Parent=Dca36867.1