Carnation DB

Dca36884.1

Annotation

9-exons
f-1
sp|D7U0C6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g03660#unknown#0F0P0C
AT1G15215.2 | Symbols: | BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:5238096-5239770 FORWARD LENGTH=258
Repeat List (scaffold39)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36884.1	7	235	236	58.89	229	57	1e-75
Target_name	Start	End	Length	Cov(%)
sp\|D7U0C6_VITVI	2	245	247	98.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36884.1	5	236	236	52.11	232	49	6e-66
Target_name	Start	End	Length	Cov(%)
AT1G15215.2	3	257	258	98.83

seqname	source	feature	start	end	score	strand	frame	group
scaffold39	Augus-PASA	mRNA	368096	371800	.	-	.	ID=Dca36884.1;Parent=Dca36884
scaffold39	Augus-PASA	exon	368096	368137	.	-	.	ID=Dca36884.1.exon1;Parent=Dca36884.1
scaffold39	Augus-PASA	exon	368233	368352	.	-	.	ID=Dca36884.1.exon2;Parent=Dca36884.1
scaffold39	Augus-PASA	exon	368458	368601	.	-	.	ID=Dca36884.1.exon3;Parent=Dca36884.1
scaffold39	Augus-PASA	exon	368809	368860	.	-	.	ID=Dca36884.1.exon4;Parent=Dca36884.1
scaffold39	Augus-PASA	exon	369323	369386	.	-	.	ID=Dca36884.1.exon5;Parent=Dca36884.1
scaffold39	Augus-PASA	exon	369504	369600	.	-	.	ID=Dca36884.1.exon6;Parent=Dca36884.1
scaffold39	Augus-PASA	exon	369685	369730	.	-	.	ID=Dca36884.1.exon7;Parent=Dca36884.1
scaffold39	Augus-PASA	exon	369826	369911	.	-	.	ID=Dca36884.1.exon8;Parent=Dca36884.1
scaffold39	Augus-PASA	exon	371741	371800	.	-	.	ID=Dca36884.1.exon9;Parent=Dca36884.1