Carnation DB

Dca36897.1

Annotation

8-exons
f-1
sp|A9PJQ9_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#GO:0000166#1F0P0C
Os01t0965600-01 Similar to growth inhibition and differentiation-related protein 88.
Repeat List (scaffold390)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36897.1	3	377	380	52.1	375	53	5e-94
Target_name	Start	End	Length	Cov(%)
sp\|A9PJQ9_9ROSI	7	359	359	98.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36897.1	13	377	380	47.1	365	48	9e-86
Target_name	Start	End	Length	Cov(%)
AT5G22120.1	17	383	383	95.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold390	Augus-PASA	mRNA	85842	90062	.	-	.	ID=Dca36897.1;Parent=Dca36897
scaffold390	Augus-PASA	exon	85842	86038	.	-	.	ID=Dca36897.1.exon1;Parent=Dca36897.1
scaffold390	Augus-PASA	exon	86558	86647	.	-	.	ID=Dca36897.1.exon2;Parent=Dca36897.1
scaffold390	Augus-PASA	exon	87159	87320	.	-	.	ID=Dca36897.1.exon3;Parent=Dca36897.1
scaffold390	Augus-PASA	exon	87903	88157	.	-	.	ID=Dca36897.1.exon4;Parent=Dca36897.1
scaffold390	Augus-PASA	exon	88765	88824	.	-	.	ID=Dca36897.1.exon5;Parent=Dca36897.1
scaffold390	Augus-PASA	exon	88911	89011	.	-	.	ID=Dca36897.1.exon6;Parent=Dca36897.1
scaffold390	Augus-PASA	exon	89116	89191	.	-	.	ID=Dca36897.1.exon7;Parent=Dca36897.1
scaffold390	Augus-PASA	exon	89861	90062	.	-	.	ID=Dca36897.1.exon8;Parent=Dca36897.1