Carnation DB

Dca36938.1

Annotation

13-exons
f-1
sp|D7SP24_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g03060#GO:0005874;GO:0005524;GO:0003777;GO:0007018#2F1P1C
AT3G51150.2 | Symbols: | ATP binding microtubule motor family protein | chr3:19002006-19006509 FORWARD LENGTH=1054
Repeat List (scaffold3906)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36938.1	648	1047	1047	15.28	400	37	5e-57
Target_name	Start	End	Length	Cov(%)
sp\|D7SP24_VITVI	553	966	973	42.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36938.1	836	1047	1047	8.88	212	44	2e-44
Target_name	Start	End	Length	Cov(%)
AT3G51150.2	836	1045	1054	19.92

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3906	Augus-PASA	mRNA	13929	19866	.	-	.	ID=Dca36938.1;Parent=Dca36938
scaffold3906	Augus-PASA	exon	13929	14229	.	-	.	ID=Dca36938.1.exon1;Parent=Dca36938.1
scaffold3906	Augustus	exon	14755	15077	.	-	.	ID=Dca36938.1.exon2;Parent=Dca36938.1
scaffold3906	Augustus	exon	15540	16763	.	-	.	ID=Dca36938.1.exon3;Parent=Dca36938.1
scaffold3906	Augustus	exon	16838	16939	.	-	.	ID=Dca36938.1.exon4;Parent=Dca36938.1
scaffold3906	Augustus	exon	17506	17839	.	-	.	ID=Dca36938.1.exon5;Parent=Dca36938.1
scaffold3906	Augustus	exon	17932	18056	.	-	.	ID=Dca36938.1.exon6;Parent=Dca36938.1
scaffold3906	Augustus	exon	18149	18214	.	-	.	ID=Dca36938.1.exon7;Parent=Dca36938.1
scaffold3906	Augustus	exon	18331	18398	.	-	.	ID=Dca36938.1.exon8;Parent=Dca36938.1
scaffold3906	Augustus	exon	18497	18578	.	-	.	ID=Dca36938.1.exon9;Parent=Dca36938.1
scaffold3906	Augustus	exon	18665	18778	.	-	.	ID=Dca36938.1.exon10;Parent=Dca36938.1
scaffold3906	Augustus	exon	18859	18959	.	-	.	ID=Dca36938.1.exon11;Parent=Dca36938.1
scaffold3906	Augustus	exon	19046	19135	.	-	.	ID=Dca36938.1.exon12;Parent=Dca36938.1
scaffold3906	Augustus	exon	19653	19866	.	-	.	ID=Dca36938.1.exon13;Parent=Dca36938.1