Carnation DB

Dca36959.1

Annotation

6-exons
f-1
sp|B9HSZ2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_230092#GO:0003735;GO:0006412#1F1P0C
AT1G67430.1 | Symbols: | Ribosomal protein L22p/L17e family protein | chr1:25262209-25263627 FORWARD LENGTH=175
Repeat List (scaffold391)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36959.1	2	174	176	92.61	173	95	7e-95
Target_name	Start	End	Length	Cov(%)
sp\|B9HSZ2_POPTR	2	174	174	99.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36959.1	1	176	176	86.93	176	87	4e-89
Target_name	Start	End	Length	Cov(%)
AT1G67430.1	1	175	175	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold391	Augus-PASA	mRNA	48213	50683	.	-	.	ID=Dca36959.1;Parent=Dca36959
scaffold391	Augus-PASA	exon	48213	48260	.	-	.	ID=Dca36959.1.exon1;Parent=Dca36959.1
scaffold391	Augus-PASA	exon	48628	48695	.	-	.	ID=Dca36959.1.exon2;Parent=Dca36959.1
scaffold391	Augus-PASA	exon	48789	48891	.	-	.	ID=Dca36959.1.exon3;Parent=Dca36959.1
scaffold391	Augus-PASA	exon	48982	49212	.	-	.	ID=Dca36959.1.exon4;Parent=Dca36959.1
scaffold391	Augus-PASA	exon	50503	50543	.	-	.	ID=Dca36959.1.exon5;Parent=Dca36959.1
scaffold391	Augus-PASA	exon	50644	50683	.	-	.	ID=Dca36959.1.exon6;Parent=Dca36959.1