Dca37149.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold3940)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37149.1 |
1 |
213 |
215 |
51.62 |
213 |
43 |
1e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
1242 |
1498 |
1499 |
17.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37149.1 |
1 |
215 |
215 |
35.81 |
215 |
30 |
8e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1223 |
1478 |
1539 |
16.63 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3940 |
Augustus |
mRNA |
10312 |
11071 |
. |
+ |
. |
ID=Dca37149.1;Parent=Dca37149 |
| scaffold3940 |
Augustus |
exon |
10312 |
10543 |
. |
+ |
. |
ID=Dca37149.1.exon1;Parent=Dca37149.1 |
| scaffold3940 |
Augustus |
exon |
10656 |
11071 |
. |
+ |
. |
ID=Dca37149.1.exon2;Parent=Dca37149.1 |
