Carnation DB

Dca37196.1

Annotation

7-exons
f-1
sp|F6GTZ8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g03000#unknown#0F0P0C
AT5G60540.1 | Symbols: EMB2407, ATPDX2, PDX2 | pyridoxine biosynthesis 2 | chr5:24336874-24338647 REVERSE LENGTH=255
Repeat List (scaffold395)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37196.1	1	249	251	74.1	249	75	3e-104
Target_name	Start	End	Length	Cov(%)
sp\|F6GTZ8_VITVI	1	251	252	99.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37196.1	1	249	251	70.11	249	70	2e-98
Target_name	Start	End	Length	Cov(%)
AT5G60540.1	1	254	255	99.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold395	Augus-PASA	mRNA	108285	111774	.	+	.	ID=Dca37196.1;Parent=Dca37196
scaffold395	Augus-PASA	exon	108285	108336	.	+	.	ID=Dca37196.1.exon1;Parent=Dca37196.1
scaffold395	Augus-PASA	exon	108612	108739	.	+	.	ID=Dca37196.1.exon2;Parent=Dca37196.1
scaffold395	Augus-PASA	exon	108847	108934	.	+	.	ID=Dca37196.1.exon3;Parent=Dca37196.1
scaffold395	Augus-PASA	exon	109108	109181	.	+	.	ID=Dca37196.1.exon4;Parent=Dca37196.1
scaffold395	Augus-PASA	exon	109460	109651	.	+	.	ID=Dca37196.1.exon5;Parent=Dca37196.1
scaffold395	Augus-PASA	exon	111468	111565	.	+	.	ID=Dca37196.1.exon6;Parent=Dca37196.1
scaffold395	Augus-PASA	exon	111651	111774	.	+	.	ID=Dca37196.1.exon7;Parent=Dca37196.1