Carnation DB

Dca37204.1

Annotation

5-exons
f-1
sp|A9PBF0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_740965#GO:0006810#0F1P0C
sp|Q9MAZ7_SOLLC#Nonclathrin coat protein zeta1-COP#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#Name=copz1#GO:0006810#0F1P0C
Repeat List (scaffold3950)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37204.1	4	175	176	78.4	172	81	1e-77
Target_name	Start	End	Length	Cov(%)
sp\|A9PBF0_POPTR	5	176	177	97.17

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37204.1	1	176	176	73.29	176	74	2e-73
Target_name	Start	End	Length	Cov(%)
AT3G09800.1	4	179	179	98.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3950	Augus-PASA	mRNA	6166	7805	.	-	.	ID=Dca37204.1;Parent=Dca37204
scaffold3950	Augus-PASA	exon	6166	6225	.	-	.	ID=Dca37204.1.exon1;Parent=Dca37204.1
scaffold3950	Augus-PASA	exon	6408	6492	.	-	.	ID=Dca37204.1.exon2;Parent=Dca37204.1
scaffold3950	Augus-PASA	exon	6805	6882	.	-	.	ID=Dca37204.1.exon3;Parent=Dca37204.1
scaffold3950	Augus-PASA	exon	6982	7129	.	-	.	ID=Dca37204.1.exon4;Parent=Dca37204.1
scaffold3950	Augustus	exon	7646	7805	.	-	.	ID=Dca37204.1.exon5;Parent=Dca37204.1