Dca37210.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3952)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37210.1 |
2 |
284 |
284 |
55.63 |
283 |
51 |
3e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
384 |
695 |
1501 |
20.78 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37210.1 |
59 |
283 |
284 |
29.22 |
225 |
33 |
5e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
128 |
383 |
707 |
36.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3952 |
Augustus |
mRNA |
3154 |
4089 |
. |
- |
. |
ID=Dca37210.1;Parent=Dca37210 |
| scaffold3952 |
Augustus |
exon |
3154 |
3297 |
. |
- |
. |
ID=Dca37210.1.exon1;Parent=Dca37210.1 |
| scaffold3952 |
Augustus |
exon |
3379 |
4089 |
. |
- |
. |
ID=Dca37210.1.exon2;Parent=Dca37210.1 |
