Carnation DB

Dca37282.1

Annotation

9-exons
f-1
sp|B9N1Z2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580758#GO:0016021#0F0P1C
Os01t0604700-01 Similar to cDNA clone:001-043-A08, full insert sequence.
Repeat List (scaffold3966)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37282.1	3	350	350	72	348	73	3e-146
Target_name	Start	End	Length	Cov(%)
sp\|B9N1Z2_POPTR	2	345	345	99.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37282.1	7	350	350	70	344	71	1e-140
Target_name	Start	End	Length	Cov(%)
AT3G02420.1	6	348	348	98.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3966	Augus-PASA	mRNA	9858	13480	.	-	.	ID=Dca37282.1;Parent=Dca37282
scaffold3966	Augus-PASA	exon	9858	10010	.	-	.	ID=Dca37282.1.exon1;Parent=Dca37282.1
scaffold3966	Augus-PASA	exon	10514	10553	.	-	.	ID=Dca37282.1.exon2;Parent=Dca37282.1
scaffold3966	Augus-PASA	exon	10635	10748	.	-	.	ID=Dca37282.1.exon3;Parent=Dca37282.1
scaffold3966	Augus-PASA	exon	10952	11036	.	-	.	ID=Dca37282.1.exon4;Parent=Dca37282.1
scaffold3966	Augus-PASA	exon	11137	11257	.	-	.	ID=Dca37282.1.exon5;Parent=Dca37282.1
scaffold3966	Augus-PASA	exon	11359	11484	.	-	.	ID=Dca37282.1.exon6;Parent=Dca37282.1
scaffold3966	Augus-PASA	exon	11628	11740	.	-	.	ID=Dca37282.1.exon7;Parent=Dca37282.1
scaffold3966	Augus-PASA	exon	11848	11968	.	-	.	ID=Dca37282.1.exon8;Parent=Dca37282.1
scaffold3966	Augus-PASA	exon	13301	13480	.	-	.	ID=Dca37282.1.exon9;Parent=Dca37282.1