Carnation DB

Dca37300.1

Annotation

9-exons
f-1
sp|B9P5D9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_588329#GO:0005488#1F0P0C
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735
Repeat List (scaffold397)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37300.1	583	731	817	6.73	149	37	1e-18
Target_name	Start	End	Length	Cov(%)
sp\|B9P5D9_POPTR	397	544	616	24.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37300.1	553	799	817	10.89	247	31	9e-34
Target_name	Start	End	Length	Cov(%)
AT1G12700.1	72	352	735	38.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold397	Augustus	mRNA	38444	45939	.	+	.	ID=Dca37300.1;Parent=Dca37300
scaffold397	Augustus	exon	38444	39361	.	+	.	ID=Dca37300.1.exon1;Parent=Dca37300.1
scaffold397	Augustus	exon	40106	40193	.	+	.	ID=Dca37300.1.exon2;Parent=Dca37300.1
scaffold397	Augustus	exon	40431	40557	.	+	.	ID=Dca37300.1.exon3;Parent=Dca37300.1
scaffold397	Augustus	exon	42539	42630	.	+	.	ID=Dca37300.1.exon4;Parent=Dca37300.1
scaffold397	Augustus	exon	43583	43711	.	+	.	ID=Dca37300.1.exon5;Parent=Dca37300.1
scaffold397	Augustus	exon	44132	44291	.	+	.	ID=Dca37300.1.exon6;Parent=Dca37300.1
scaffold397	Augustus	exon	44561	44732	.	+	.	ID=Dca37300.1.exon7;Parent=Dca37300.1
scaffold397	Augustus	exon	44839	45321	.	+	.	ID=Dca37300.1.exon8;Parent=Dca37300.1
scaffold397	Augustus	exon	45655	45939	.	+	.	ID=Dca37300.1.exon9;Parent=Dca37300.1