Carnation DB

Dca37477.1

Annotation

5-exons
f-1
sp|A9P939_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_666735#GO:0016881#1F0P0C
sp|B9RA92_RICCO#Ubiquitin-conjugating enzyme E2-25kD, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1504700#GO:0004842#1F0P0C
Repeat List (scaffold3997)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37477.1	1	194	194	82.47	194	83	2e-93
Target_name	Start	End	Length	Cov(%)
sp\|A9P939_POPTR	1	194	194	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37477.1	1	194	194	73.71	194	70	7e-81
Target_name	Start	End	Length	Cov(%)
AT5G50870.2	1	203	203	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3997	Augus-PASA	mRNA	17559	22807	.	+	.	ID=Dca37477.1;Parent=Dca37477
scaffold3997	Augus-PASA	exon	17559	17736	.	+	.	ID=Dca37477.1.exon1;Parent=Dca37477.1
scaffold3997	Augus-PASA	exon	20102	20150	.	+	.	ID=Dca37477.1.exon2;Parent=Dca37477.1
scaffold3997	Augus-PASA	exon	22163	22322	.	+	.	ID=Dca37477.1.exon3;Parent=Dca37477.1
scaffold3997	Augus-PASA	exon	22503	22592	.	+	.	ID=Dca37477.1.exon4;Parent=Dca37477.1
scaffold3997	Augus-PASA	exon	22700	22807	.	+	.	ID=Dca37477.1.exon5;Parent=Dca37477.1