Carnation DB

Dca37488.1

Annotation

9-exons
f-1
sp|A5C449_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_036193#GO:0005622;GO:0008270#1F0P1C
Os03t0304400-01 Zinc finger, RING/FYVE/PHD-type domain containing protein.
Repeat List (scaffold4)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37488.1	9	623	1319	16.6	615	33	6e-59
Target_name	Start	End	Length	Cov(%)
sp\|A5C449_VITVI	11	627	1391	44.35

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37488.1	4	179	1319	8.56	176	54	8e-59
Target_name	Start	End	Length	Cov(%)
Os03t0304400-01	11	221	1463	14.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4	Augustus	mRNA	36327	43312	.	+	.	ID=Dca37488.1;Parent=Dca37488
scaffold4	Augustus	exon	36327	36404	.	+	.	ID=Dca37488.1.exon1;Parent=Dca37488.1
scaffold4	Augustus	exon	37530	37634	.	+	.	ID=Dca37488.1.exon2;Parent=Dca37488.1
scaffold4	Augustus	exon	37866	37967	.	+	.	ID=Dca37488.1.exon3;Parent=Dca37488.1
scaffold4	Augustus	exon	38093	38177	.	+	.	ID=Dca37488.1.exon4;Parent=Dca37488.1
scaffold4	Augustus	exon	38409	38478	.	+	.	ID=Dca37488.1.exon5;Parent=Dca37488.1
scaffold4	Augustus	exon	38572	38616	.	+	.	ID=Dca37488.1.exon6;Parent=Dca37488.1
scaffold4	Augustus	exon	39187	41886	.	+	.	ID=Dca37488.1.exon7;Parent=Dca37488.1
scaffold4	Augustus	exon	42110	42326	.	+	.	ID=Dca37488.1.exon8;Parent=Dca37488.1
scaffold4	Augustus	exon	42755	43312	.	+	.	ID=Dca37488.1.exon9;Parent=Dca37488.1