Carnation DB

Dca37509.1

Annotation

6-exons
f-1
sp|F6HZD4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_07s0005g02090#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
AT1G02460.1 | Symbols: | Pectin lyase-like superfamily protein | chr1:504897-507099 REVERSE LENGTH=491
Repeat List (scaffold4)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37509.1	57	443	443	62.75	387	70	3e-169
Target_name	Start	End	Length	Cov(%)
sp\|F6HZD4_VITVI	69	465	465	85.37

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37509.1	57	443	443	59.59	387	66	4e-158
Target_name	Start	End	Length	Cov(%)
AT1G02460.1	88	488	491	81.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4	Augustus	mRNA	188956	190873	.	-	.	ID=Dca37509.1;Parent=Dca37509
scaffold4	Augustus	exon	188956	189407	.	-	.	ID=Dca37509.1.exon1;Parent=Dca37509.1
scaffold4	Augustus	exon	189587	189682	.	-	.	ID=Dca37509.1.exon2;Parent=Dca37509.1
scaffold4	Augustus	exon	189805	190012	.	-	.	ID=Dca37509.1.exon3;Parent=Dca37509.1
scaffold4	Augustus	exon	190086	190130	.	-	.	ID=Dca37509.1.exon4;Parent=Dca37509.1
scaffold4	Augustus	exon	190267	190434	.	-	.	ID=Dca37509.1.exon5;Parent=Dca37509.1
scaffold4	Augustus	exon	190511	190873	.	-	.	ID=Dca37509.1.exon6;Parent=Dca37509.1