Carnation DB

Dca37525.1

Annotation

9-exons
f-1
sp|B9GM15_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1065779#GO:0008060;GO:0008270;GO:0032312#2F1P0C
sp|B9RGB8_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1452710#GO:0008060;GO:0008270;GO:0032312#2F1P0C
Repeat List (scaffold4)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37525.1	75	427	427	55.97	353	68	6e-138
Target_name	Start	End	Length	Cov(%)
sp\|B9GM15_POPTR	11	352	358	95.53

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37525.1	12	427	427	57.61	416	59	8e-130
Target_name	Start	End	Length	Cov(%)
AT3G07940.1	1	379	385	98.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4	Augustus	mRNA	307117	311108	.	+	.	ID=Dca37525.1;Parent=Dca37525
scaffold4	Augustus	exon	307117	307192	.	+	.	ID=Dca37525.1.exon1;Parent=Dca37525.1
scaffold4	Augus-PASA	exon	308352	308501	.	+	.	ID=Dca37525.1.exon2;Parent=Dca37525.1
scaffold4	Augus-PASA	exon	308878	308962	.	+	.	ID=Dca37525.1.exon3;Parent=Dca37525.1
scaffold4	Augus-PASA	exon	309059	309134	.	+	.	ID=Dca37525.1.exon4;Parent=Dca37525.1
scaffold4	Augus-PASA	exon	309607	309770	.	+	.	ID=Dca37525.1.exon5;Parent=Dca37525.1
scaffold4	Augus-PASA	exon	309873	310128	.	+	.	ID=Dca37525.1.exon6;Parent=Dca37525.1
scaffold4	Augus-PASA	exon	310259	310375	.	+	.	ID=Dca37525.1.exon7;Parent=Dca37525.1
scaffold4	Augus-PASA	exon	310631	310726	.	+	.	ID=Dca37525.1.exon8;Parent=Dca37525.1
scaffold4	Augus-PASA	exon	310845	311108	.	+	.	ID=Dca37525.1.exon9;Parent=Dca37525.1