Carnation DB

Dca37538.1

Annotation

6-exons
f-1
sp|D7T7W9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_16s0039g02760#GO:0016592;GO:0001104#1F0P1C
AT5G19910.2 | Symbols: MED31 | SOH1 family protein | chr5:6731484-6732821 REVERSE LENGTH=226
Repeat List (scaffold4)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37538.1	6	197	197	74.11	192	74	3e-79
Target_name	Start	End	Length	Cov(%)
sp\|D7T7W9_VITVI	1	198	198	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37538.1	16	195	197	69.54	180	64	1e-64
Target_name	Start	End	Length	Cov(%)
AT5G19910.2	16	224	226	92.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4	Augus-PASA	mRNA	429900	432329	.	-	.	ID=Dca37538.1;Parent=Dca37538
scaffold4	Augus-PASA	exon	429900	429912	.	-	.	ID=Dca37538.1.exon1;Parent=Dca37538.1
scaffold4	Augus-PASA	exon	430036	430292	.	-	.	ID=Dca37538.1.exon2;Parent=Dca37538.1
scaffold4	Augus-PASA	exon	431274	431352	.	-	.	ID=Dca37538.1.exon3;Parent=Dca37538.1
scaffold4	Augus-PASA	exon	431432	431528	.	-	.	ID=Dca37538.1.exon4;Parent=Dca37538.1
scaffold4	Augus-PASA	exon	432087	432184	.	-	.	ID=Dca37538.1.exon5;Parent=Dca37538.1
scaffold4	Augus-PASA	exon	432280	432329	.	-	.	ID=Dca37538.1.exon6;Parent=Dca37538.1