Carnation DB

Dca37548.1

Annotation

6-exons
f-1
sp|B9GLW1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_829314#GO:0005634;GO:0043565#1F0P1C
sp|B9SHT5_RICCO#Negative cofactor 2 transcriptional co-repressor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0621420#GO:0005634;GO:0043565#1F0P1C
Repeat List (scaffold4)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37548.1	1	272	281	58.36	272	58	4e-64
Target_name	Start	End	Length	Cov(%)
sp\|B9GLW1_POPTR	1	271	282	96.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37548.1	1	266	281	48.39	266	48	4e-52
Target_name	Start	End	Length	Cov(%)
Os05t0494100-01	1	273	291	93.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4	Augus-PASA	mRNA	501602	505458	.	-	.	ID=Dca37548.1;Parent=Dca37548
scaffold4	Augus-PASA	exon	501602	502069	.	-	.	ID=Dca37548.1.exon1;Parent=Dca37548.1
scaffold4	Augus-PASA	exon	502361	502418	.	-	.	ID=Dca37548.1.exon2;Parent=Dca37548.1
scaffold4	Augus-PASA	exon	502564	502683	.	-	.	ID=Dca37548.1.exon3;Parent=Dca37548.1
scaffold4	Augus-PASA	exon	504410	504503	.	-	.	ID=Dca37548.1.exon4;Parent=Dca37548.1
scaffold4	Augus-PASA	exon	504593	504665	.	-	.	ID=Dca37548.1.exon5;Parent=Dca37548.1
scaffold4	Augus-PASA	exon	505426	505458	.	-	.	ID=Dca37548.1.exon6;Parent=Dca37548.1