Dca37682.1
Annotation
- 2-exons
- f-1
- sp|Q10IB2_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g35940#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4005)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37682.1 |
1 |
230 |
234 |
61.53 |
230 |
57 |
5e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10IB2_ORYSJ |
395 |
647 |
649 |
38.98 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37682.1 |
1 |
168 |
234 |
20.94 |
168 |
30 |
4e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1109 |
1267 |
1401 |
11.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4005 |
Augustus |
mRNA |
18850 |
19731 |
. |
- |
. |
ID=Dca37682.1;Parent=Dca37682 |
| scaffold4005 |
Augustus |
exon |
18850 |
19041 |
. |
- |
. |
ID=Dca37682.1.exon1;Parent=Dca37682.1 |
| scaffold4005 |
Augustus |
exon |
19219 |
19731 |
. |
- |
. |
ID=Dca37682.1.exon2;Parent=Dca37682.1 |
