Dca3770.1
Annotation
- 3-exons
- f-1
- sp|Q9FIC5_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1136)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3770.1 |
37 |
1132 |
1133 |
48.19 |
1096 |
47 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9FIC5_ARATH |
297 |
1447 |
1462 |
78.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3770.1 |
85 |
1123 |
1133 |
32.48 |
1039 |
34 |
3e-145
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1389 |
1401 |
72.16 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1136 |
Augustus |
mRNA |
56435 |
60057 |
. |
+ |
. |
ID=Dca3770.1;Parent=Dca3770 |
| scaffold1136 |
Augustus |
exon |
56435 |
56534 |
. |
+ |
. |
ID=Dca3770.1.exon1;Parent=Dca3770.1 |
| scaffold1136 |
Augustus |
exon |
56667 |
59408 |
. |
+ |
. |
ID=Dca3770.1.exon2;Parent=Dca3770.1 |
| scaffold1136 |
Augustus |
exon |
59498 |
60057 |
. |
+ |
. |
ID=Dca3770.1.exon3;Parent=Dca3770.1 |
