Carnation DB

Dca37718.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold401)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37718.1	1	140	778	8.86	140	49	1e-33
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	474	614	1553	9.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37718.1	3	140	778	5.52	138	30	3e-11
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	130	271	707	20.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold401	Augustus	mRNA	109613	117359	.	+	.	ID=Dca37718.1;Parent=Dca37718
scaffold401	Augustus	exon	109613	111157	.	+	.	ID=Dca37718.1.exon1;Parent=Dca37718.1
scaffold401	Augustus	exon	111253	111411	.	+	.	ID=Dca37718.1.exon2;Parent=Dca37718.1
scaffold401	Augustus	exon	116348	116524	.	+	.	ID=Dca37718.1.exon3;Parent=Dca37718.1
scaffold401	Augustus	exon	116604	116756	.	+	.	ID=Dca37718.1.exon4;Parent=Dca37718.1
scaffold401	Augustus	exon	117057	117359	.	+	.	ID=Dca37718.1.exon5;Parent=Dca37718.1