Dca37916.1
Annotation
- 4-exons
- f-1
- sp|B9N4G9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_581863#GO:0008270#1F0P0C
- AT1G09060.3 | Symbols: | Zinc finger, RING-type;Transcription factor jumonji/aspartyl beta-hydroxylase | chr1:2921235-2925254 REVERSE LENGTH=944
- Repeat List (scaffold4039)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37916.1 |
46 |
212 |
217 |
41.01 |
167 |
52 |
1e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N4G9_POPTR |
150 |
316 |
979 |
17.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37916.1 |
36 |
210 |
217 |
38.24 |
175 |
48 |
1e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G09060.3 |
163 |
326 |
944 |
17.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4039 |
Augustus |
mRNA |
23697 |
24776 |
. |
- |
. |
ID=Dca37916.1;Parent=Dca37916 |
| scaffold4039 |
Augustus |
exon |
23697 |
23849 |
. |
- |
. |
ID=Dca37916.1.exon1;Parent=Dca37916.1 |
| scaffold4039 |
Augustus |
exon |
23942 |
24041 |
. |
- |
. |
ID=Dca37916.1.exon2;Parent=Dca37916.1 |
| scaffold4039 |
Augustus |
exon |
24125 |
24267 |
. |
- |
. |
ID=Dca37916.1.exon3;Parent=Dca37916.1 |
| scaffold4039 |
Augustus |
exon |
24519 |
24776 |
. |
- |
. |
ID=Dca37916.1.exon4;Parent=Dca37916.1 |
