Carnation DB

Dca37994.1

Annotation

12-exons
f-1
sp|C5XXS0_SORBI#Putative uncharacterized protein Sb04g026360#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb04g026360#GO:0005524;GO:0016874#2F0P0C
Os02t0621700-01 Similar to Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS-beta).
Repeat List (scaffold405)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37994.1	1	419	423	82.97	419	84	0
Target_name	Start	End	Length	Cov(%)
sp\|C5XXS0_SORBI	2	420	422	99.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37994.1	1	419	423	82.5	419	84	0
Target_name	Start	End	Length	Cov(%)
Os02t0621700-01	2	420	423	99.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold405	Augus-PASA	mRNA	143167	148704	.	+	.	ID=Dca37994.1;Parent=Dca37994
scaffold405	Augus-PASA	exon	143167	143265	.	+	.	ID=Dca37994.1.exon1;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	143878	143988	.	+	.	ID=Dca37994.1.exon2;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	144262	144373	.	+	.	ID=Dca37994.1.exon3;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	144591	144655	.	+	.	ID=Dca37994.1.exon4;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	145493	145570	.	+	.	ID=Dca37994.1.exon5;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	146670	146744	.	+	.	ID=Dca37994.1.exon6;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	146836	146988	.	+	.	ID=Dca37994.1.exon7;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	147074	147208	.	+	.	ID=Dca37994.1.exon8;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	147656	147820	.	+	.	ID=Dca37994.1.exon9;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	147972	148094	.	+	.	ID=Dca37994.1.exon10;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	148430	148501	.	+	.	ID=Dca37994.1.exon11;Parent=Dca37994.1
scaffold405	Augus-PASA	exon	148621	148704	.	+	.	ID=Dca37994.1.exon12;Parent=Dca37994.1