Carnation DB

Dca37998.1

Annotation

6-exons
f-1
sp|F6H496_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0068g00380#unknown#0F0P0C
AT4G26190.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:13262473-13266282 REVERSE LENGTH=1057
Repeat List (scaffold4050)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37998.1	247	505	505	29.1	259	57	8e-88
Target_name	Start	End	Length	Cov(%)
sp\|F6H496_VITVI	136	394	394	65.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37998.1	229	496	505	22.77	268	43	2e-59
Target_name	Start	End	Length	Cov(%)
AT4G26190.1	794	1054	1057	24.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4050	Augustus	mRNA	18930	22549	.	-	.	ID=Dca37998.1;Parent=Dca37998
scaffold4050	Augustus	exon	18930	19102	.	-	.	ID=Dca37998.1.exon1;Parent=Dca37998.1
scaffold4050	Augustus	exon	19703	19763	.	-	.	ID=Dca37998.1.exon2;Parent=Dca37998.1
scaffold4050	Augustus	exon	19859	20044	.	-	.	ID=Dca37998.1.exon3;Parent=Dca37998.1
scaffold4050	Augustus	exon	21192	21258	.	-	.	ID=Dca37998.1.exon4;Parent=Dca37998.1
scaffold4050	Augustus	exon	21426	21507	.	-	.	ID=Dca37998.1.exon5;Parent=Dca37998.1
scaffold4050	Augustus	exon	21601	22549	.	-	.	ID=Dca37998.1.exon6;Parent=Dca37998.1