Dca3845.1
Annotation
- 3-exons
- f-3
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold11387)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3845.1 |
1 |
181 |
237 |
45.56 |
181 |
51 |
2e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
514 |
719 |
1717 |
11.99 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3845.1 |
1 |
57 |
237 |
8.86 |
57 |
37 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os09t0122300-01 |
87 |
142 |
150 |
37.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11387 |
Augustus |
mRNA |
1 |
981 |
. |
+ |
. |
ID=Dca3845.1;Parent=Dca3845 |
| scaffold11387 |
Augustus |
exon |
1 |
186 |
. |
+ |
. |
ID=Dca3845.1.exon1;Parent=Dca3845.1 |
| scaffold11387 |
Augustus |
exon |
282 |
539 |
. |
+ |
. |
ID=Dca3845.1.exon2;Parent=Dca3845.1 |
| scaffold11387 |
Augustus |
exon |
710 |
981 |
. |
+ |
. |
ID=Dca3845.1.exon3;Parent=Dca3845.1 |
