Carnation DB

Dca38464.1

Annotation

2-exons
f-2
sp|F6GU59_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g08480#GO:0005524;GO:0003677;GO:0004386#3F0P0C
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing protein / helicase domain-containing protein | chr2:7097638-7101182 FORWARD LENGTH=888
Repeat List (scaffold412)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38464.1	1	142	142	76.76	142	77	3e-61
Target_name	Start	End	Length	Cov(%)
sp\|F6GU59_VITVI	540	681	681	20.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38464.1	1	142	142	69.71	142	70	7e-58
Target_name	Start	End	Length	Cov(%)
AT2G16390.1	747	888	888	15.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold412	PASA	mRNA	120395	121299	.	-	.	ID=Dca38464.1;Parent=Dca38464
scaffold412	PASA	exon	120395	120771	.	-	.	ID=Dca38464.1.exon1;Parent=Dca38464.1
scaffold412	PASA	exon	120874	121299	.	-	.	ID=Dca38464.1.exon2;Parent=Dca38464.1
scaffold412	Augustus	mRNA	120874	127588	.	-	.	ID=Dca38464.2;Parent=Dca38464
scaffold412	Augustus	exon	120874	122654	.	-	.	ID=Dca38464.2.exon1;Parent=Dca38464.2
scaffold412	Augustus	exon	123058	123213	.	-	.	ID=Dca38464.2.exon2;Parent=Dca38464.2
scaffold412	Augustus	exon	125632	125817	.	-	.	ID=Dca38464.2.exon3;Parent=Dca38464.2
scaffold412	Augustus	exon	126158	126540	.	-	.	ID=Dca38464.2.exon4;Parent=Dca38464.2
scaffold412	Augustus	exon	127558	127588	.	-	.	ID=Dca38464.2.exon5;Parent=Dca38464.2