Dca38596.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold4139)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38596.1 |
127 |
748 |
779 |
59.82 |
622 |
71 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
679 |
1337 |
1717 |
38.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38596.1 |
259 |
720 |
779 |
19.89 |
462 |
31 |
1e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
523 |
1003 |
1539 |
31.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4139 |
Augustus |
mRNA |
19319 |
22756 |
. |
- |
. |
ID=Dca38596.1;Parent=Dca38596 |
| scaffold4139 |
Augustus |
exon |
19319 |
19926 |
. |
- |
. |
ID=Dca38596.1.exon1;Parent=Dca38596.1 |
| scaffold4139 |
Augustus |
exon |
20052 |
21406 |
. |
- |
. |
ID=Dca38596.1.exon2;Parent=Dca38596.1 |
| scaffold4139 |
Augustus |
exon |
22380 |
22756 |
. |
- |
. |
ID=Dca38596.1.exon3;Parent=Dca38596.1 |
