Dca38686.1
Annotation
- 2-exons
- f-1
- sp|Q2QRU0_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g26420#unknown#0F0P0C
- Repeat List (scaffold4155)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38686.1 |
1 |
306 |
316 |
59.81 |
306 |
55 |
1e-108
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QRU0_ORYSJ |
242 |
585 |
724 |
47.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38686.1 |
193 |
306 |
316 |
16.45 |
114 |
46 |
9e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
379 |
491 |
1262 |
8.95 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4155 |
Augustus |
mRNA |
18403 |
19591 |
. |
- |
. |
ID=Dca38686.1;Parent=Dca38686 |
| scaffold4155 |
Augustus |
exon |
18403 |
18728 |
. |
- |
. |
ID=Dca38686.1.exon1;Parent=Dca38686.1 |
| scaffold4155 |
Augustus |
exon |
18967 |
19591 |
. |
- |
. |
ID=Dca38686.1.exon2;Parent=Dca38686.1 |
