Carnation DB

Dca3889.1

Annotation

5-exons
f-1
sp|F6H3A3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g02390#GO:0008270#1F0P0C
sp|B9RNL9_RICCO#Ring finger protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0918520#GO:0008270#1F0P0C
Repeat List (scaffold114)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3889.1	1	482	489	49.69	482	44	9e-99
Target_name	Start	End	Length	Cov(%)
sp\|F6H3A3_VITVI	1	549	550	99.81

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3889.1	1	481	489	41.51	481	39	2e-68
Target_name	Start	End	Length	Cov(%)
AT5G24870.1	1	512	520	98.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold114	Augustus	mRNA	144645	146622	.	+	.	ID=Dca3889.1;Parent=Dca3889
scaffold114	Augustus	exon	144645	145670	.	+	.	ID=Dca3889.1.exon1;Parent=Dca3889.1
scaffold114	Augustus	exon	145768	145818	.	+	.	ID=Dca3889.1.exon2;Parent=Dca3889.1
scaffold114	Augustus	exon	145923	146021	.	+	.	ID=Dca3889.1.exon3;Parent=Dca3889.1
scaffold114	Augustus	exon	146101	146247	.	+	.	ID=Dca3889.1.exon4;Parent=Dca3889.1
scaffold114	Augustus	exon	146476	146622	.	+	.	ID=Dca3889.1.exon5;Parent=Dca3889.1