Carnation DB

Dca38944.1

Annotation

9-exons
f-1
sp|B9RWC2_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1017960#GO:0005488#1F0P0C
sp|G7JA73_MEDTR#Small subunit processome component-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_3g083970#GO:0005488#1F0P0C
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38944.1	1	480	480	44.16	480	44	7e-107
Target_name	Start	End	Length	Cov(%)
sp\|B9RWC2_RICCO	138	599	2535	18.22

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38944.1	1	480	480	38.54	480	38	5e-79
Target_name	Start	End	Length	Cov(%)
AT4G30990.2	139	598	2620	17.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augustus	mRNA	7954	11574	.	+	.	ID=Dca38944.1;Parent=Dca38944
scaffold42	Augustus	exon	7954	8016	.	+	.	ID=Dca38944.1.exon1;Parent=Dca38944.1
scaffold42	Augustus	exon	8113	8186	.	+	.	ID=Dca38944.1.exon2;Parent=Dca38944.1
scaffold42	Augustus	exon	8303	8409	.	+	.	ID=Dca38944.1.exon3;Parent=Dca38944.1
scaffold42	Augustus	exon	9204	9386	.	+	.	ID=Dca38944.1.exon4;Parent=Dca38944.1
scaffold42	Augustus	exon	9512	9715	.	+	.	ID=Dca38944.1.exon5;Parent=Dca38944.1
scaffold42	Augustus	exon	9810	10020	.	+	.	ID=Dca38944.1.exon6;Parent=Dca38944.1
scaffold42	Augustus	exon	10111	10182	.	+	.	ID=Dca38944.1.exon7;Parent=Dca38944.1
scaffold42	Augustus	exon	10277	10623	.	+	.	ID=Dca38944.1.exon8;Parent=Dca38944.1
scaffold42	Augustus	exon	11393	11574	.	+	.	ID=Dca38944.1.exon9;Parent=Dca38944.1