Carnation DB

Dca38986.1

Annotation

7-exons
f-1
sp|B9N1K0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_579497#GO:0003824#1F0P0C
sp|B9T7M7_RICCO#Catalytic, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0252890#GO:0003824#1F0P0C
Repeat List (scaffold42)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38986.1	1	411	481	55.5	411	64	1e-155
Target_name	Start	End	Length	Cov(%)
sp\|B9N1K0_POPTR	1	393	417	94.24

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38986.1	1	411	481	54.88	411	64	6e-150
Target_name	Start	End	Length	Cov(%)
AT1G52920.1	1	386	410	94.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold42	Augustus	mRNA	276636	279581	.	-	.	ID=Dca38986.1;Parent=Dca38986
scaffold42	Augustus	exon	276636	277112	.	-	.	ID=Dca38986.1.exon1;Parent=Dca38986.1
scaffold42	Augustus	exon	277201	277512	.	-	.	ID=Dca38986.1.exon2;Parent=Dca38986.1
scaffold42	Augustus	exon	277599	277715	.	-	.	ID=Dca38986.1.exon3;Parent=Dca38986.1
scaffold42	Augustus	exon	277822	277933	.	-	.	ID=Dca38986.1.exon4;Parent=Dca38986.1
scaffold42	Augustus	exon	278476	278654	.	-	.	ID=Dca38986.1.exon5;Parent=Dca38986.1
scaffold42	Augustus	exon	278842	278922	.	-	.	ID=Dca38986.1.exon6;Parent=Dca38986.1
scaffold42	Augustus	exon	279414	279581	.	-	.	ID=Dca38986.1.exon7;Parent=Dca38986.1