Dca39084.1
Annotation
- 2-exons
- f-1
- sp|B1N668_SOLLC#Copia LTR rider#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#ORFNames=LYC_68t000004, SUNLYC_67t000007#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold421)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39084.1 |
1 |
251 |
251 |
66.53 |
251 |
60 |
1e-90
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B1N668_SOLLC |
289 |
569 |
1307 |
21.49 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca39084.1 |
74 |
181 |
251 |
21.51 |
108 |
50 |
2e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00300.1 |
23 |
130 |
145 |
74.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold421 |
Augustus |
mRNA |
142673 |
143511 |
. |
+ |
. |
ID=Dca39084.1;Parent=Dca39084 |
| scaffold421 |
Augustus |
exon |
142673 |
143207 |
. |
+ |
. |
ID=Dca39084.1.exon1;Parent=Dca39084.1 |
| scaffold421 |
Augustus |
exon |
143291 |
143511 |
. |
+ |
. |
ID=Dca39084.1.exon2;Parent=Dca39084.1 |
