Carnation DB

Dca39312.1

Annotation

8-exons
f-1
sp|Q308B2_SOLTU#Putative uncharacterized protein#Solanum tuberosum (Potato)#unknown#GO:0003676;GO:0000166#2F0P0C
sp|B9SZR9_RICCO#Serine/arginine rich splicing factor, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0460560#GO:0003676;GO:0000166#2F0P0C
Repeat List (scaffold425)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39312.1	1	252	252	67.06	252	65	1e-64
Target_name	Start	End	Length	Cov(%)
sp\|Q308B2_SOLTU	1	258	258	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39312.1	1	219	252	56.34	219	61	1e-53
Target_name	Start	End	Length	Cov(%)
Os07t0623300-01	1	234	276	84.78

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold425	Augus-PASA	mRNA	49216	51291	.	+	.	ID=Dca39312.1;Parent=Dca39312
scaffold425	Augus-PASA	exon	49216	49291	.	+	.	ID=Dca39312.1.exon1;Parent=Dca39312.1
scaffold425	Augus-PASA	exon	49386	49464	.	+	.	ID=Dca39312.1.exon2;Parent=Dca39312.1
scaffold425	Augus-PASA	exon	49572	49651	.	+	.	ID=Dca39312.1.exon3;Parent=Dca39312.1
scaffold425	Augus-PASA	exon	49762	49828	.	+	.	ID=Dca39312.1.exon4;Parent=Dca39312.1
scaffold425	Augus-PASA	exon	50561	50623	.	+	.	ID=Dca39312.1.exon5;Parent=Dca39312.1
scaffold425	Augus-PASA	exon	50728	50934	.	+	.	ID=Dca39312.1.exon6;Parent=Dca39312.1
scaffold425	Augus-PASA	exon	51023	51203	.	+	.	ID=Dca39312.1.exon7;Parent=Dca39312.1
scaffold425	Augus-PASA	exon	51286	51291	.	+	.	ID=Dca39312.1.exon8;Parent=Dca39312.1