Carnation DB

Dca39408.1

Annotation

12-exons
f-1
sp|F6GWQ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g02950#GO:0005634;GO:0003677;GO:0008270;GO:0016570;GO:0006352#2F2P1C
AT3G51120.1 | Symbols: | DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding | chr3:18986026-18991886 REVERSE LENGTH=1292
Repeat List (scaffold427)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39408.1	45	1077	1151	39.61	1033	41	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GWQ1_VITVI	90	1178	1447	75.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39408.1	46	759	1151	28.23	714	44	3e-168
Target_name	Start	End	Length	Cov(%)
AT3G51120.1	78	769	1292	53.56

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold427	Augus-PASA	mRNA	76927	83477	.	-	.	ID=Dca39408.1;Parent=Dca39408
scaffold427	Augus-PASA	exon	76927	77058	.	-	.	ID=Dca39408.1.exon1;Parent=Dca39408.1
scaffold427	Augustus	exon	77221	77304	.	-	.	ID=Dca39408.1.exon2;Parent=Dca39408.1
scaffold427	Augustus	exon	77396	77526	.	-	.	ID=Dca39408.1.exon3;Parent=Dca39408.1
scaffold427	Augustus	exon	77617	78930	.	-	.	ID=Dca39408.1.exon4;Parent=Dca39408.1
scaffold427	Augustus	exon	79031	79176	.	-	.	ID=Dca39408.1.exon5;Parent=Dca39408.1
scaffold427	Augustus	exon	79521	79561	.	-	.	ID=Dca39408.1.exon6;Parent=Dca39408.1
scaffold427	Augustus	exon	79638	79697	.	-	.	ID=Dca39408.1.exon7;Parent=Dca39408.1
scaffold427	Augustus	exon	79999	80126	.	-	.	ID=Dca39408.1.exon8;Parent=Dca39408.1
scaffold427	Augustus	exon	80486	81377	.	-	.	ID=Dca39408.1.exon9;Parent=Dca39408.1
scaffold427	Augustus	exon	81772	81959	.	-	.	ID=Dca39408.1.exon10;Parent=Dca39408.1
scaffold427	Augustus	exon	83002	83081	.	-	.	ID=Dca39408.1.exon11;Parent=Dca39408.1
scaffold427	Augustus	exon	83218	83477	.	-	.	ID=Dca39408.1.exon12;Parent=Dca39408.1