Dca3972.1
Annotation
- 3-exons
- f-1
- sp|F2QA93_ORYRU#ORW1943Ba0077G13.16 protein#Oryza rufipogon (Brownbeard rice) (Asian wild rice)#Name=ORW1943Ba0077G13.16#GO:0016021;GO:0005886#0F0P2C
- Repeat List (scaffold1144)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3972.1 |
52 |
214 |
217 |
43.31 |
163 |
58 |
2e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F2QA93_ORYRU |
20 |
182 |
186 |
87.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3972.1 |
23 |
215 |
217 |
52.07 |
193 |
58 |
5e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G27370.1 |
26 |
218 |
221 |
87.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1144 |
Augustus |
mRNA |
31123 |
31944 |
. |
- |
. |
ID=Dca3972.1;Parent=Dca3972 |
| scaffold1144 |
Augustus |
exon |
31123 |
31338 |
. |
- |
. |
ID=Dca3972.1.exon1;Parent=Dca3972.1 |
| scaffold1144 |
Augustus |
exon |
31425 |
31548 |
. |
- |
. |
ID=Dca3972.1.exon2;Parent=Dca3972.1 |
| scaffold1144 |
Augustus |
exon |
31631 |
31944 |
. |
- |
. |
ID=Dca3972.1.exon3;Parent=Dca3972.1 |
