Carnation DB

Dca39882.1

Annotation

6-exons
f-1
sp|H6TNS0_ELAGV#Putative 24 kDa seed maturation protein#Elaeis guineensis var tenera (Oil palm)#unknown#unknown#0F0P0C
Repeat List (scaffold434)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39882.1	96	286	315	43.8	191	73	9e-81
Target_name	Start	End	Length	Cov(%)
sp\|H6TNS0_ELAGV	47	237	253	75.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca39882.1	94	286	315	37.77	193	62	3e-72
Target_name	Start	End	Length	Cov(%)
Os05t0526400-01	44	236	252	76.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold434	Augus-PASA	mRNA	15175	17964	.	+	.	ID=Dca39882.1;Parent=Dca39882
scaffold434	Augus-PASA	exon	15175	15520	.	+	.	ID=Dca39882.1.exon1;Parent=Dca39882.1
scaffold434	Augus-PASA	exon	16320	16500	.	+	.	ID=Dca39882.1.exon2;Parent=Dca39882.1
scaffold434	Augus-PASA	exon	16612	16753	.	+	.	ID=Dca39882.1.exon3;Parent=Dca39882.1
scaffold434	Augus-PASA	exon	17087	17156	.	+	.	ID=Dca39882.1.exon4;Parent=Dca39882.1
scaffold434	Augustus	exon	17260	17377	.	+	.	ID=Dca39882.1.exon5;Parent=Dca39882.1
scaffold434	Augustus	exon	17874	17964	.	+	.	ID=Dca39882.1.exon6;Parent=Dca39882.1