Carnation DB

Dca4022.1

Annotation

12-exons
f-1
sp|B9HQG6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_721419#GO:0005524;GO:0004674#2F0P0C
Os03t0749800-02 Similar to Tousled-like kinase (Fragment).
Repeat List (scaffold11479)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4022.1	85	540	543	63.53	456	72	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HQG6_POPTR	188	671	676	71.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4022.1	85	540	543	60.95	456	69	0
Target_name	Start	End	Length	Cov(%)
Os03t0749800-02	190	673	679	71.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold11479	Augustus	mRNA	3268	6273	.	+	.	ID=Dca4022.1;Parent=Dca4022
scaffold11479	Augustus	exon	3268	3522	.	+	.	ID=Dca4022.1.exon1;Parent=Dca4022.1
scaffold11479	Augustus	exon	3623	3700	.	+	.	ID=Dca4022.1.exon2;Parent=Dca4022.1
scaffold11479	Augustus	exon	3933	4045	.	+	.	ID=Dca4022.1.exon3;Parent=Dca4022.1
scaffold11479	Augustus	exon	4163	4229	.	+	.	ID=Dca4022.1.exon4;Parent=Dca4022.1
scaffold11479	Augustus	exon	4324	4390	.	+	.	ID=Dca4022.1.exon5;Parent=Dca4022.1
scaffold11479	Augustus	exon	4497	4594	.	+	.	ID=Dca4022.1.exon6;Parent=Dca4022.1
scaffold11479	Augustus	exon	4689	4859	.	+	.	ID=Dca4022.1.exon7;Parent=Dca4022.1
scaffold11479	Augustus	exon	4997	5207	.	+	.	ID=Dca4022.1.exon8;Parent=Dca4022.1
scaffold11479	Augustus	exon	5308	5572	.	+	.	ID=Dca4022.1.exon9;Parent=Dca4022.1
scaffold11479	Augustus	exon	5690	5744	.	+	.	ID=Dca4022.1.exon10;Parent=Dca4022.1
scaffold11479	Augustus	exon	5865	6026	.	+	.	ID=Dca4022.1.exon11;Parent=Dca4022.1
scaffold11479	Augustus	exon	6184	6273	.	+	.	ID=Dca4022.1.exon12;Parent=Dca4022.1