Carnation DB

Dca4038.1

Annotation

7-exons
f-1
sp|B9IQB1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_738750#unknown#0F0P0C
AT1G71480.1 | Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr1:26932079-26933086 FORWARD LENGTH=216
Repeat List (scaffold1149)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4038.1	42	209	242	50.82	168	74	1e-65
Target_name	Start	End	Length	Cov(%)
sp\|B9IQB1_POPTR	2	163	164	98.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4038.1	63	209	242	45.04	147	75	1e-62
Target_name	Start	End	Length	Cov(%)
AT1G71480.1	69	215	216	68.05

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1149	Augustus	mRNA	73477	77275	.	-	.	ID=Dca4038.1;Parent=Dca4038
scaffold1149	Augustus	exon	73477	73579	.	-	.	ID=Dca4038.1.exon1;Parent=Dca4038.1
scaffold1149	Augustus	exon	74473	74528	.	-	.	ID=Dca4038.1.exon2;Parent=Dca4038.1
scaffold1149	Augustus	exon	74637	74688	.	-	.	ID=Dca4038.1.exon3;Parent=Dca4038.1
scaffold1149	Augustus	exon	74766	74847	.	-	.	ID=Dca4038.1.exon4;Parent=Dca4038.1
scaffold1149	Augustus	exon	74931	75045	.	-	.	ID=Dca4038.1.exon5;Parent=Dca4038.1
scaffold1149	Augustus	exon	75493	75712	.	-	.	ID=Dca4038.1.exon6;Parent=Dca4038.1
scaffold1149	Augustus	exon	77175	77275	.	-	.	ID=Dca4038.1.exon7;Parent=Dca4038.1