Dca4039.1
Annotation
- 4-exons
- f-1
- sp|B9IQB1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_738750#unknown#0F0P0C
- AT1G71480.1 | Symbols: | Nuclear transport factor 2 (NTF2) family protein | chr1:26932079-26933086 FORWARD LENGTH=216
- Repeat List (scaffold1149)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4039.1 |
59 |
208 |
214 |
51.4 |
150 |
72 |
1e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IQB1_POPTR |
2 |
145 |
164 |
87.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4039.1 |
81 |
207 |
214 |
44.85 |
127 |
76 |
4e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G71480.1 |
70 |
196 |
216 |
58.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1149 |
Augustus |
mRNA |
81441 |
82692 |
. |
- |
. |
ID=Dca4039.1;Parent=Dca4039 |
| scaffold1149 |
Augustus |
exon |
81441 |
81516 |
. |
- |
. |
ID=Dca4039.1.exon1;Parent=Dca4039.1 |
| scaffold1149 |
Augustus |
exon |
81594 |
81675 |
. |
- |
. |
ID=Dca4039.1.exon2;Parent=Dca4039.1 |
| scaffold1149 |
Augustus |
exon |
81759 |
81873 |
. |
- |
. |
ID=Dca4039.1.exon3;Parent=Dca4039.1 |
| scaffold1149 |
Augustus |
exon |
82321 |
82692 |
. |
- |
. |
ID=Dca4039.1.exon4;Parent=Dca4039.1 |
