Dca40521.1
Annotation
- 4-exons
- f-1
- sp|B9H2M6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_859008#GO:0005739;GO:0006461#0F1P1C
- AT2G34050.1 | Symbols: | INVOLVED IN: protein complex assembly; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: ATP11 (InterPro:IPR010591); Has 304 Blast hits to 304 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 101; Fungi - 112; Plants - 39; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink). | chr2:14382843-14384198 REVERSE LENGTH=248
- Repeat List (scaffold4440)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40521.1 |
4 |
228 |
228 |
73.24 |
225 |
71 |
2e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H2M6_POPTR |
7 |
244 |
244 |
97.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40521.1 |
21 |
226 |
228 |
66.22 |
206 |
73 |
6e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G34050.1 |
40 |
246 |
248 |
83.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4440 |
Augus-PASA |
mRNA |
13205 |
15297 |
. |
- |
. |
ID=Dca40521.1;Parent=Dca40521 |
| scaffold4440 |
Augus-PASA |
exon |
13205 |
13509 |
. |
- |
. |
ID=Dca40521.1.exon1;Parent=Dca40521.1 |
| scaffold4440 |
Augus-PASA |
exon |
14109 |
14167 |
. |
- |
. |
ID=Dca40521.1.exon2;Parent=Dca40521.1 |
| scaffold4440 |
Augus-PASA |
exon |
14246 |
14325 |
. |
- |
. |
ID=Dca40521.1.exon3;Parent=Dca40521.1 |
| scaffold4440 |
Augustus |
exon |
15055 |
15297 |
. |
- |
. |
ID=Dca40521.1.exon4;Parent=Dca40521.1 |
