Dca4058.1
Annotation
- 4-exons
- f-1
- sp|B9H0A5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_800153#GO:0016020;GO:0005524;GO:0016887#2F0P1C
- sp|B9SMW0_RICCO#ATP-binding cassette transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0471430#GO:0016020;GO:0005524;GO:0015416;GO:0015417#3F0P1C
- Repeat List (scaffold115)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4058.1 |
1 |
222 |
225 |
65.77 |
222 |
67 |
1e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H0A5_POPTR |
1 |
220 |
1403 |
15.68 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4058.1 |
1 |
221 |
225 |
60 |
221 |
61 |
8e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G15520.1 |
1 |
220 |
1423 |
15.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold115 |
Augustus |
mRNA |
14213 |
16957 |
. |
- |
. |
ID=Dca4058.1;Parent=Dca4058 |
| scaffold115 |
Augustus |
exon |
14213 |
14260 |
. |
- |
. |
ID=Dca4058.1.exon1;Parent=Dca4058.1 |
| scaffold115 |
Augustus |
exon |
15114 |
15198 |
. |
- |
. |
ID=Dca4058.1.exon2;Parent=Dca4058.1 |
| scaffold115 |
Augustus |
exon |
15326 |
15535 |
. |
- |
. |
ID=Dca4058.1.exon3;Parent=Dca4058.1 |
| scaffold115 |
Augustus |
exon |
16623 |
16957 |
. |
- |
. |
ID=Dca4058.1.exon4;Parent=Dca4058.1 |
