Dca40582.1
Annotation
- 4-exons
- f-1
- sp|A9PIW5_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#GO:0051539;GO:0016992#2F0P0C
- Os04t0455800-01 Similar to Lipoic acid synthetase, mitochondrial precursor (Lip-syn) (Lipoate synthase) (mLIP1).
- Repeat List (scaffold4450)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40582.1 |
37 |
398 |
407 |
74.2 |
362 |
84 |
7e-169
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PIW5_9ROSI |
19 |
380 |
385 |
94.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40582.1 |
62 |
400 |
407 |
69.77 |
339 |
84 |
7e-166
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0455800-01 |
50 |
381 |
383 |
86.68 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4450 |
Augustus |
mRNA |
18956 |
22906 |
. |
+ |
. |
ID=Dca40582.1;Parent=Dca40582 |
| scaffold4450 |
Augustus |
exon |
18956 |
19455 |
. |
+ |
. |
ID=Dca40582.1.exon1;Parent=Dca40582.1 |
| scaffold4450 |
Augus-PASA |
exon |
21910 |
22121 |
. |
+ |
. |
ID=Dca40582.1.exon2;Parent=Dca40582.1 |
| scaffold4450 |
Augustus |
exon |
22266 |
22645 |
. |
+ |
. |
ID=Dca40582.1.exon3;Parent=Dca40582.1 |
| scaffold4450 |
Augustus |
exon |
22775 |
22906 |
. |
+ |
. |
ID=Dca40582.1.exon4;Parent=Dca40582.1 |
