Carnation DB

Dca40633.1

Annotation

6-exons
f-1
sp|F6I231_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0207g00240#GO:0005488#1F0P0C
AT4G37210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:17512376-17514421 FORWARD LENGTH=492
Repeat List (scaffold446)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40633.1	19	482	482	57.67	464	59	4e-136
Target_name	Start	End	Length	Cov(%)
sp\|F6I231_VITVI	33	485	485	93.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40633.1	17	471	482	47.3	455	48	2e-108
Target_name	Start	End	Length	Cov(%)
AT4G37210.1	34	482	492	91.26

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold446	Augus-PASA	mRNA	58311	62197	.	-	.	ID=Dca40633.1;Parent=Dca40633
scaffold446	Augus-PASA	exon	58311	58646	.	-	.	ID=Dca40633.1.exon1;Parent=Dca40633.1
scaffold446	Augustus	exon	59149	59479	.	-	.	ID=Dca40633.1.exon2;Parent=Dca40633.1
scaffold446	Augus-PASA	exon	59872	59962	.	-	.	ID=Dca40633.1.exon3;Parent=Dca40633.1
scaffold446	Augus-PASA	exon	60074	60271	.	-	.	ID=Dca40633.1.exon4;Parent=Dca40633.1
scaffold446	Augus-PASA	exon	60578	60831	.	-	.	ID=Dca40633.1.exon5;Parent=Dca40633.1
scaffold446	Augus-PASA	exon	61959	62197	.	-	.	ID=Dca40633.1.exon6;Parent=Dca40633.1