Dca40700.1
Annotation
- 2-exons
- f-1
- sp|Q2R8R3_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g11290#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4469)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40700.1 |
7 |
190 |
190 |
35.78 |
184 |
34 |
5e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R8R3_ORYSJ |
1015 |
1207 |
1658 |
11.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca40700.1 |
117 |
189 |
190 |
15.26 |
73 |
40 |
8e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G24090.1 |
257 |
329 |
353 |
20.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4469 |
Augustus |
mRNA |
33341 |
34180 |
. |
+ |
. |
ID=Dca40700.1;Parent=Dca40700 |
| scaffold4469 |
Augustus |
exon |
33341 |
33508 |
. |
+ |
. |
ID=Dca40700.1.exon1;Parent=Dca40700.1 |
| scaffold4469 |
Augustus |
exon |
33776 |
34180 |
. |
+ |
. |
ID=Dca40700.1.exon2;Parent=Dca40700.1 |
