Carnation DB

Dca4081.1

Annotation

10-exons
f-1
sp|F6HXG7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_09s0002g07520#GO:0003684;GO:0008534;GO:0008270;GO:0006284;GO:0006289#3F2P0C
sp|B9RVA4_RICCO#Formamidopyrimidine-DNA glycosylase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0901410#GO:0003684;GO:0008534;GO:0008270;GO:0006284;GO:0006289#3F2P0C
Repeat List (scaffold115)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4081.1	1	293	328	69.51	293	78	2e-137
Target_name	Start	End	Length	Cov(%)
sp\|F6HXG7_VITVI	1	293	410	71.46

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4081.1	1	296	328	66.15	296	74	2e-126
Target_name	Start	End	Length	Cov(%)
AT1G52500.2	1	297	390	76.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold115	Augustus	mRNA	228354	232443	.	-	.	ID=Dca4081.1;Parent=Dca4081
scaffold115	Augustus	exon	228354	228539	.	-	.	ID=Dca4081.1.exon1;Parent=Dca4081.1
scaffold115	Augustus	exon	228731	228765	.	-	.	ID=Dca4081.1.exon2;Parent=Dca4081.1
scaffold115	Augustus	exon	229212	229314	.	-	.	ID=Dca4081.1.exon3;Parent=Dca4081.1
scaffold115	Augustus	exon	229553	229630	.	-	.	ID=Dca4081.1.exon4;Parent=Dca4081.1
scaffold115	Augustus	exon	229771	229821	.	-	.	ID=Dca4081.1.exon5;Parent=Dca4081.1
scaffold115	Augustus	exon	230407	230532	.	-	.	ID=Dca4081.1.exon6;Parent=Dca4081.1
scaffold115	Augustus	exon	230613	230681	.	-	.	ID=Dca4081.1.exon7;Parent=Dca4081.1
scaffold115	Augustus	exon	230805	230862	.	-	.	ID=Dca4081.1.exon8;Parent=Dca4081.1
scaffold115	Augustus	exon	231359	231410	.	-	.	ID=Dca4081.1.exon9;Parent=Dca4081.1
scaffold115	Augustus	exon	232215	232443	.	-	.	ID=Dca4081.1.exon10;Parent=Dca4081.1