Carnation DB

Dca40857.1

Annotation

5-exons
f-1
sp|B9H065_POPTR#Autophagy-related protein 3#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_817262#GO:0005737;GO:0006914;GO:0015031#0F2P1C
Repeat List (scaffold4498)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40857.1	19	115	144	48.61	97	72	2e-35
Target_name	Start	End	Length	Cov(%)
sp\|B9H065_POPTR	55	152	315	31.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40857.1	19	115	144	45.83	97	69	7e-35
Target_name	Start	End	Length	Cov(%)
AT5G61500.1	55	150	313	30.67

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4498	Augustus	mRNA	9795	12587	.	-	.	ID=Dca40857.1;Parent=Dca40857
scaffold4498	Augustus	exon	9795	9819	.	-	.	ID=Dca40857.1.exon1;Parent=Dca40857.1
scaffold4498	Augustus	exon	10432	10600	.	-	.	ID=Dca40857.1.exon2;Parent=Dca40857.1
scaffold4498	Augustus	exon	10682	10798	.	-	.	ID=Dca40857.1.exon3;Parent=Dca40857.1
scaffold4498	Augustus	exon	11106	11176	.	-	.	ID=Dca40857.1.exon4;Parent=Dca40857.1
scaffold4498	Augustus	exon	12535	12587	.	-	.	ID=Dca40857.1.exon5;Parent=Dca40857.1