Carnation DB

Dca4095.1

Annotation

7-exons
f-1
sp|F6HU84_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02750#GO:0008270#1F0P0C
AT1G32810.2 | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr1:11881810-11885843 FORWARD LENGTH=1068
Repeat List (scaffold1150)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4095.1	1	176	884	11.65	176	58	2e-59
Target_name	Start	End	Length	Cov(%)
sp\|F6HU84_VITVI	1	164	1177	13.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4095.1	1	176	884	10.63	176	53	9e-52
Target_name	Start	End	Length	Cov(%)
AT1G32810.2	1	164	1068	15.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1150	Augustus	mRNA	51036	54632	.	+	.	ID=Dca4095.1;Parent=Dca4095
scaffold1150	Augustus	exon	51036	51620	.	+	.	ID=Dca4095.1.exon1;Parent=Dca4095.1
scaffold1150	Augustus	exon	51843	52892	.	+	.	ID=Dca4095.1.exon2;Parent=Dca4095.1
scaffold1150	Augustus	exon	53022	53180	.	+	.	ID=Dca4095.1.exon3;Parent=Dca4095.1
scaffold1150	Augus-PASA	exon	53278	53599	.	+	.	ID=Dca4095.1.exon4;Parent=Dca4095.1
scaffold1150	Augus-PASA	exon	53688	53758	.	+	.	ID=Dca4095.1.exon5;Parent=Dca4095.1
scaffold1150	Augus-PASA	exon	53861	53983	.	+	.	ID=Dca4095.1.exon6;Parent=Dca4095.1
scaffold1150	Augus-PASA	exon	54288	54632	.	+	.	ID=Dca4095.1.exon7;Parent=Dca4095.1